PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G086600.1.p
Common NamePRUPE_ppa025455mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 173aa    MW: 19741.1 Da    PI: 9.4728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G086600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-1290137655
                         HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                           +Er+RR+++ + ++ Lr+ lP       ++K s ++ + ++v+YIk+Lq
  Prupe.5G086600.1.p  90 RDIERQRRQEMATLYASLRSQLPLeY---LKGKRSISDHVHETVNYIKHLQ 137
                         679*********************77...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-1381155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.89E-882141No hitNo description
PROSITE profilePS5088812.48184136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-990137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-490142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-991154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDYIPSNTLQ FDQALQQADE LFQISCLPYT EHTTQENQAL PPTPSQDGRD LTCRPKSGQK  60
RRASISSSSI TFGEIEDEQN PKGNKKIMPR DIERQRRQEM ATLYASLRSQ LPLEYLKGKR  120
SISDHVHETV NYIKHLQSNI QELHNKRDGL KRSCDTSCSS STSTTTKSKR RR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208837.11e-125hypothetical protein PRUPE_ppa025455mg, partial
TrEMBLM5W9P01e-125M5W9P0_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-24bHLH family protein